Article-Journal

Functional R code is rare in species distribution and abundance papers
Analytic reproducibility is important for scientific credibility in ecology, but the extent to which scientific literature meets this …
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Estimating genus-specific effects of non-native honey bees and urbanization on wild bee communities: A case study in Maryland, United States
Non-native species have the potential to detrimentally affect native species through resource competition, disease transmission, and …
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spAbundance: An R package for single-species and multi-species spatially-explicit abundance models
We present the spAbundance R package for fitting spatially-explicit abundance models
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Guidelines for the use of spatially-varying coefficients in species distribution models
Species distribution models (SDMs) are increasingly applied across macroscales using detection-nondetection data. These models …
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'Fractional replication' in single-visit multi-season occupancy models: Impacts of spatiotemporal autocorrelation on identifiability
Understanding variation in species occupancy is an important task for conservation. When assessing occupancy patterns over multiple …
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A within-lake occupancy model for starry stonewort, Nitellopsis obtusa, to support early detection and monitoring
To efficiently detect aquatic invasive species early in an invasion when control may still be possible, predictions about which …
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Paired acoustic recordings and point count surveys reveal Clark's nutcracker and whitebark pine associations across Glacier National Park
Global declines in tree populations have led to dramatic shifts in forest ecosystem composition, biodiversity, and functioning. These …
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Modeling complex species-environment relationships through spatially-varying coefficient occupancy models
Occupancy models are frequently used by ecologists to quantify spatial variation in species distributions while accounting for …
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Context matters in ecological forecasting: Lessons in predicting species distributions
Forecasting the future state of a species is a tricky process, as there are numerous hidden factors that influence species trajectories …
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Scenario planning and multispecies occupancy models reveal positive avian responses to restoration of afforested woodlands
Scenario planning is a powerful approach for assessing restoration outcomes under alternative futures. However, developing plausible …
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