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Integrated community models: A framework combining multispecies data sources to estimate the status, trends and dynamics of biodiversity
We present an integrated community modeling framework to provide for a holistic evaluation of the effects of global change on biodiversity
Elise F. Zipkin
,
Jeffrey W. Doser
,
Courtney L. Davis
,
Wendy Leuenberger
,
Samuel Ayebare
,
Kayla L. Davis
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Code
Dataset
Project
An environmental habitat gradient and within-habitat segregation enable co-existence of ecologically similar bird species
Niche theory predicts that ecologically similar species can coexist through multidimensional niche partitioning. However, owing to the …
Samuel Ayebare
,
Jeffrey W. Doser
,
Andrew J. Plumptre
,
Isaiah Owiunji
,
Hamlet Mugabe
,
Elise F. Zipkin
PDF
Code
Dataset
Project
Joint species distribution models with imperfect detection for high-dimensional spatial data
Determining the spatial distributions of species and communities is a key task in ecology and conservation efforts. Joint species …
Jeffrey W. Doser
,
Andrew O. Finley
,
Sudipto Banerjee
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Dataset
Project
Source Document
spOccupancy: An R package for fitting single-species, multi-species, and integrated spatial occupancy models
We present the spOccupancy R package for fitting spatially-explicit occupancy models
Jeffrey W. Doser
,
Andrew O. Finley
,
Marc Kéry
,
Elise F. Zipkin
PDF
Code
Dataset
Project
Video
Source Document
Integrated community occupancy models: A framework to assess occurrence and biodiversity dynamics using multiple data sources
We present an integrated community occupancy model that units principles of data integration and hierarchical community modeling.
Jeffrey W. Doser
,
Wendy Leuenberger
,
T. Scott Sillett
,
Michael T. Hallworth
,
Elise F. Zipkin
PDF
Code
Dataset
Project
Integrating automated acoustic vocalization data and point count surveys for estimation of bird abundance
Monitoring wildlife abundance across space and time is an essential task to study their population dynamics and inform effective …
Jeffrey W. Doser
,
Andrew O. Finley
,
Aaron S. Weed
,
Elise F. Zipkin
PDF
Code
Dataset
Project
Trends in bird abundance differ among protected forests but not bird guilds
Improved monitoring and associated inferential tools to efficiently identify declining bird populations, particularly of rare or …
Jeffrey W. Doser
,
Aaron S. Weed
,
Elise F. Zipkin
,
Kathryn M. Miller
,
Andrew O. Finley
PDF
Code
Dataset
Project
ForestFit: An R package for modeling plant size distributions
Modeling the diameter distribution of trees in forest stands is a frequent application in ecology that supports key biologically and …
Mahdi Teimouri
,
Jeffrey W. Doser
,
Andrew O. Finley
PDF
Code
Project
Assessing soundscape disturbance through hierarchical models and acoustic indices: A case study on a shelterwood logged northern Michigan forest
A Bayesian approach to hypothesis testing to assess the influence of a shelterwood logging on northern Michigan soundscapes.
Jeffrey W. Doser
,
Andrew O. Finley
,
Eric P. Kasten
,
Stuart H. Gage
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Code
Dataset
Project
arXiv
Characterizing functional relationships between anthropogenic and biological sounds: A western New York state soundscape case study
We develop a modeling framework to characterize the functional relationship between anthropogenic and biological sounds in western New York state.
Jeffrey W. Doser
,
Kristina M. Hannam
,
Andrew O. Finley
PDF
Code
Project
arXiv
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